Staphylococcus epidermidis bacteria against a backdrop of a pig farm

Superbugs in Swine: What You Need to Know About Antibiotic-Resistant Staph

"New research highlights the growing threat of methicillin-resistant Staphylococcus epidermidis (MRSE) in pigs and its potential impact on human health. Learn how this superbug is spreading and what it means for your food."


Staphylococcus epidermidis, like other staph species, is a common bacterium. It typically resides harmlessly on the skin and in the respiratory, urogenital, and intestinal tracts of both animals and humans. However, this seemingly benign bacterium is increasingly becoming an opportunistic pathogen, causing infections in hospitals and communities worldwide.

A significant public health concern arises when food becomes contaminated with antibiotic-resistant strains of S. epidermidis. This poses the risk of these resistant bacteria spreading through the food chain and transferring their resistance to other, more dangerous bacteria, such as Staphylococcus aureus.

Recent research has focused on the draft genome sequence of a methicillin-resistant S. epidermidis (MRSE) strain, specifically sequence type 59 (ST59), isolated from a pooled rectal sample of pigs in South Africa. This article explores the key findings of this research, shedding light on the genetic traits and resistance mechanisms involved.

The Rise of Antibiotic-Resistant Staph in Swine: What the Science Says

Staphylococcus epidermidis bacteria against a backdrop of a pig farm

The study focused on a specific strain, S. epidermidis PR246B0, isolated from a pooled rectal sample collected from pigs in a South African abattoir. Antimicrobial susceptibility testing revealed that this isolate was resistant to multiple classes of antibiotics, prompting a deeper investigation into its genetic makeup.

Key findings from the genome sequencing include:

  • Genetic Composition: The genome consists of a circular chromosome of 2,537,769 base pairs with a G-C content of 32.32%.
  • Antibiotic Resistance Genes: The genome contains various genes conferring resistance to beta-lactams, fluoroquinolones, aminoglycosides, fosfomycin, macrolides, lincosamides, and tetracycline.
  • Plasmid Replicons: Analysis revealed the presence of seven plasmid replicon types, indicating the potential for the bacteria to readily share its resistance with other bacteria.
  • Sequence Type: The isolate was identified as sequence type 59 (ST59), belonging to clonal complex 2 (CC2).
The study also identified several antimicrobial resistance genes, including those responsible for resistance to beta-lactams (mecA and blaZ), aminoglycosides (aac(6')-aph(2″)), fluoroquinolones (norA), fosfomycin (fosA), macrolides (erm(C)), lincosamides (lnu(A)), and tetracycline (tet(K)).

Why This Matters: Implications for Human Health and the Food Chain

This research marks the first report of methicillin-resistant S. epidermidis (MRSE) ST59 in asymptomatic, healthy pigs in South Africa. The presence of various resistance genes highlights the potential role of commensal bacteria and food animals in spreading antimicrobial resistance across different environments.

The findings underscore the public health risks associated with the transfer of commensal bacteria from the food production system to communities and, ultimately, to healthcare settings. The potential for antibiotic resistance to spread through the food chain necessitates a closer look at the farm-to-plate continuum.

The genome sequence data can serve as a reference for future comparative analyses of methicillin-resistant S. epidermidis on the African continent, leading to a better understanding of antimicrobial resistance mechanisms and informing strategies to mitigate the spread of these resistant bacteria. Further investigations are needed to fully understand the transmission dynamics and potential risks associated with MRSE in food animals.

About this Article -

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This article is based on research published under:

DOI-LINK: 10.1016/j.jgar.2018.10.016, Alternate LINK

Title: Draft Genome Sequence Of A Methicillin-Resistant Staphylococcus Epidermidis Isolate From Swine

Subject: Microbiology (medical)

Journal: Journal of Global Antimicrobial Resistance

Publisher: Elsevier BV

Authors: Luria Leslie Founou, Raspail Carrel Founou, Mushal Allam, Arshad Ismail, Sabiha Yusuf Essack

Published: 2018-12-01

Everything You Need To Know

1

What is Staphylococcus epidermidis and what is its role in the context of this research?

Staphylococcus epidermidis is a common bacterium typically found on the skin and in various tracts of both animals and humans. It's generally harmless, but it can become an opportunistic pathogen, causing infections, especially in healthcare settings. The study identifies a specific strain of methicillin-resistant Staphylococcus epidermidis (MRSE). This strain is resistant to many antibiotics.

2

Why is the discovery of methicillin-resistant Staphylococcus epidermidis (MRSE) in pigs important?

The identification of methicillin-resistant Staphylococcus epidermidis (MRSE) in pigs is significant because it highlights the potential for the spread of antibiotic resistance through the food chain. The MRSE can contaminate food products, potentially transferring resistance genes to other, more dangerous bacteria, such as Staphylococcus aureus. The presence of MRSE in pigs raises concerns about human health and food safety.

3

What are the key genetic findings related to the MRSE strain?

The research details the genetic makeup of a methicillin-resistant Staphylococcus epidermidis (MRSE) strain, specifically sequence type 59 (ST59). The genome analysis revealed the presence of genes conferring resistance to several classes of antibiotics, including beta-lactams, fluoroquinolones, aminoglycosides, fosfomycin, macrolides, lincosamides, and tetracycline. Additionally, the presence of plasmid replicon types suggests the bacteria's capacity to readily share resistance with other bacteria.

4

What are the implications of the identified antibiotic resistance genes?

The various antibiotic resistance genes found in the methicillin-resistant Staphylococcus epidermidis (MRSE) ST59 strain, such as mecA and blaZ (beta-lactams), aac(6')-aph(2″) (aminoglycosides), norA (fluoroquinolones), fosA (fosfomycin), erm(C) (macrolides), lnu(A) (lincosamides), and tet(K) (tetracycline), pose a serious threat. These genes enable the bacterium to survive exposure to multiple antibiotics, making infections harder to treat. The sharing of these resistance genes via plasmids further complicates the issue, potentially spreading resistance to other bacteria.

5

What are the broader implications of finding MRSE ST59 in pigs?

The study indicates the first report of methicillin-resistant Staphylococcus epidermidis (MRSE) ST59 in asymptomatic, healthy pigs in South Africa. This is concerning because it suggests that commensal bacteria in food animals can contribute to the spread of antimicrobial resistance. This finding implies that measures need to be taken to monitor and control the spread of antibiotic-resistant bacteria in the food chain to safeguard human health.

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